r - Error: C stack usage is too close to the limit (read_sav) - Stack Overflow

admin管理员组

文章数量:1122832

I am working with R in VS code and I am facing this error whenever I want to view tbl_df from read_sav function.

Error: C stack usage 7956480 is too close to the limit

Interestingly, I don't get this error on R Studio.

Here is a reproducible example:

library(haven)
path <- system.file("examples", "iris.sav", package = "haven")
df <- read_sav(path)
view(df)

Changing to data.frame doesn't solve the issue.

Update:

sessionInfo() 

R version 4.4.1 (2024-06-14)
Platform: aarch64-apple-darwin20
Running under: macOS 15.1.1

Matrix products: default
BLAS:   /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRblas.0.dylib 
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib;  LAPACK version 3.12.0

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

time zone: Europe/London
tzcode source: internal

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] haven_2.5.4

loaded via a namespace (and not attached):
 [1] utf8_1.2.4      R6_2.5.1        tzdb_0.4.0      magrittr_2.0.3 
 [5] glue_1.8.0      tibble_3.2.1    pkgconfig_2.0.3 lifecycle_1.0.4
 [9] readr_2.1.5     cli_3.6.3       fansi_1.0.6     vctrs_0.6.5    
[13] compiler_4.4.1  forcats_1.0.0   hms_1.1.3       pillar_1.9.0   
[17] rlang_1.1.4     jsonlite_1.8.9

Thanks.

I am working with R in VS code and I am facing this error whenever I want to view tbl_df from read_sav function.

Error: C stack usage 7956480 is too close to the limit

Interestingly, I don't get this error on R Studio.

Here is a reproducible example:

library(haven)
path <- system.file("examples", "iris.sav", package = "haven")
df <- read_sav(path)
view(df)

Changing to data.frame doesn't solve the issue.

Update:

sessionInfo() 

R version 4.4.1 (2024-06-14)
Platform: aarch64-apple-darwin20
Running under: macOS 15.1.1

Matrix products: default
BLAS:   /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRblas.0.dylib 
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib;  LAPACK version 3.12.0

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

time zone: Europe/London
tzcode source: internal

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] haven_2.5.4

loaded via a namespace (and not attached):
 [1] utf8_1.2.4      R6_2.5.1        tzdb_0.4.0      magrittr_2.0.3 
 [5] glue_1.8.0      tibble_3.2.1    pkgconfig_2.0.3 lifecycle_1.0.4
 [9] readr_2.1.5     cli_3.6.3       fansi_1.0.6     vctrs_0.6.5    
[13] compiler_4.4.1  forcats_1.0.0   hms_1.1.3       pillar_1.9.0   
[17] rlang_1.1.4     jsonlite_1.8.9

Thanks.

• r
• visual-studio-code

Share Improve this question Follow edited Nov 28, 2024 at 14:48 MIM asked Nov 22, 2024 at 13:50 MIMMIM 111 silver badge11 bronze badge 1

• That means you ran out of memory. If this is unexpected, then you probably have fallen into a recursion. – Bastián Olea Herrera Commented Nov 23, 2024 at 12:32

Add a comment  | 

2 Answers 2

Sorted by: Reset to default 2

Have you tried uppercase View(df)? I'm not sure where the lowercase view comes from but it doesn't come from haven. But where ever it comes from it sounds like it's recursively calling itself.

I had the same problem. No Idea what causes it. But what helped me was saving the df as csv and then loading it in again. No more problems!

本文标签： rError C stack usage is too close to the limit (readsav)Stack Overflow